tag:blogger.com,1999:blog-3959019086245829585.post5180667640251763281..comments2024-03-13T05:58:05.617+00:00Comments on R for Biochemists: Gene Expression Analysis and Visualization for VizBi 2016 (Pt 1)Unknownnoreply@blogger.comBlogger2125tag:blogger.com,1999:blog-3959019086245829585.post-83833451513340346862017-03-01T21:29:59.263+00:002017-03-01T21:29:59.263+00:00Hi Hossein,
Thanks for your message.
T...Hi Hossein, <br /> Thanks for your message. <br /> The packages and workflow are show in the script on this page:<br /> http://rforbiochemists.blogspot.co.uk/p/a-script-to.html <br /> Please give it a go. The downloading can be a little slow. <br /> If it works, do say. <br /> If not, please tell me and I will try to help further. <br />Best wishes, <br />Paul<br /><br />Paul Brennanhttps://www.blogger.com/profile/12648151135957634553noreply@blogger.comtag:blogger.com,1999:blog-3959019086245829585.post-12410358776283379732017-02-27T14:30:58.287+00:002017-02-27T14:30:58.287+00:00Hi Paul,
Thanks for sharing your knowledge. I am w...Hi Paul,<br />Thanks for sharing your knowledge. I am wondering if I could find the script that has been used for the generation of these data ( per-processing, Normalization, deferentially expressed gene, etc. ). I am currently running some samples on Affymetrix HTA 2.0 chip and would like to know how to process them. I can figure out how to correctly set design and contrast matrices, since I don't have Treatment Vs Untreated group, I want all the samples beings compare against each other. <br /><br />Thanks in advance.<br />best,<br />HosseinHosseinnoreply@blogger.com